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Loop extrusion drives very different dynamics for Rouse chains in bulk solutions and at interfaces
http://hdl.handle.net/2237/00031022
http://hdl.handle.net/2237/000310224bfbd707-c833-458b-963d-99acf6cacd69
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TYTSHSEPL20190301revVer2 (185.0 kB)
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TYTSHSEPL20190301revVer2Suppl (68.5 kB)
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Item type | 学術雑誌論文 / Journal Article(1) | |||||
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公開日 | 2019-12-19 | |||||
タイトル | ||||||
タイトル | Loop extrusion drives very different dynamics for Rouse chains in bulk solutions and at interfaces | |||||
言語 | en | |||||
著者 |
Yamamoto, Tetsuya
× Yamamoto, Tetsuya× Sakaue, Takahiro× Schiessel, Helmut |
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アクセス権 | ||||||
アクセス権 | open access | |||||
アクセス権URI | http://purl.org/coar/access_right/c_abf2 | |||||
権利 | ||||||
言語 | en | |||||
権利情報 | This is an author-created, un-copyedited version of an article published in {EPL (Europhysics Letters)}. IOP Publishing Ltd is not responsible for any errors or omissions in this version of the manuscript or any version derived from it. The Version of Record is available online at {https://doi.org/10.1209/0295-5075/127/38002}. | |||||
抄録 | ||||||
内容記述 | The loop extrusion theory predicts that the loops of chromosomes are produced by cohesin molecules that uni-directionally extrude a chromatin fiber. We here use an extension of the Rouse model to predict the chain conformational dynamics driven by the loop extrusion process. Our theory predicts that in a bulk solution, the mean square distance between the starting and ending sites of the loop extrusion process decreases with a constant rate. This is because the tension generated by the loop extrusion process drives the displacement of the starting site towards the ending site. In contrast, when the cohesin is entrapped at an interface, the mean square distance does not decrease until the tension generated by the loop extrusion process arrives at the ending site. This theory highlights the fact that the chain dynamics strongly depends on the mobility of the chain segments bound by cohesin. | |||||
言語 | en | |||||
内容記述タイプ | Abstract | |||||
内容記述 | ||||||
内容記述 | ファイル公開:2020-09-05 | |||||
言語 | ja | |||||
内容記述タイプ | Other | |||||
出版者 | ||||||
言語 | en | |||||
出版者 | IOP publishing | |||||
言語 | ||||||
言語 | eng | |||||
資源タイプ | ||||||
資源タイプresource | http://purl.org/coar/resource_type/c_6501 | |||||
タイプ | journal article | |||||
出版タイプ | ||||||
出版タイプ | AM | |||||
出版タイプResource | http://purl.org/coar/version/c_ab4af688f83e57aa | |||||
DOI | ||||||
関連タイプ | isVersionOf | |||||
識別子タイプ | DOI | |||||
関連識別子 | https://doi.org/10.1209/0295-5075/127/38002 | |||||
ISSN(print) | ||||||
収録物識別子タイプ | PISSN | |||||
収録物識別子 | 1286-4854 | |||||
書誌情報 |
en : EPL (Europhysics Letters) 巻 127, 号 3, p. 38002, 発行日 2019-09-05 |
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著者版フラグ | ||||||
値 | author |