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  1. B300 農学部/生命農学研究科
  2. B300a 雑誌掲載論文
  3. 学術雑誌

Active community structure of microeukaryotes in a rice (Oryza sativa L.) rhizosphere revealed by RNA-based PCR-DGGE

http://hdl.handle.net/2237/25724
http://hdl.handle.net/2237/25724
c0291e83-d356-415d-8c55-742584398acc
名前 / ファイル ライセンス アクション
Asiloglu-Murase_SSPN2016.pdf Asiloglu-Murase_SSPN2016.pdf (5.7 MB)
Item type 学術雑誌論文 / Journal Article(1)
公開日 2017-03-17
タイトル
タイトル Active community structure of microeukaryotes in a rice (Oryza sativa L.) rhizosphere revealed by RNA-based PCR-DGGE
言語 en
著者 Asiloglu, Rasit

× Asiloglu, Rasit

WEKO 69875

en Asiloglu, Rasit

Search repository
Murase, Jun

× Murase, Jun

WEKO 69876

en Murase, Jun

Search repository
アクセス権
アクセス権 open access
アクセス権URI http://purl.org/coar/access_right/c_abf2
権利
言語 en
権利情報 This is an Accepted Manuscript of an article published by Taylor & Francis Group in Bioscience, Biotechnology, and Biochemistry on 24/10/2016, available online: http://www.tandfonline.com/10.1080/00380768.2016.1238281.
キーワード
主題Scheme Other
主題 microbial food web
キーワード
主題Scheme Other
主題 paddy soil
キーワード
主題Scheme Other
主題 protists
キーワード
主題Scheme Other
主題 protozoa
キーワード
主題Scheme Other
主題 rice
抄録
内容記述 The rhizosphere is one of the hot spots in soil ecosystems for a variety of microorganisms. In this study, we explored the seasonal change of the microeukaryotic community of a rice rhizosphere focusing on the active members through an RNA-based molecular approach. Rice plants (Oryza sativa L.) were grown in a pot where the rhizosphere was compartmented from bulk soil with a nylon gauze. The Eh in the rhizosphere compartment indicated that the rhizosphere was under oxic conditions in the initial stage of plant growth and then suddenly became anoxic or suboxic. Denaturing gradient gel electrophoresis targeting 18S rRNA-transcribed cDNA demonstrated that the active community of microeukaryotes in the rice rhizosphere was different from that in the bulk soil. The rhizosphere community showed a temporal shift in accordance with the shift of the redox conditions having three stages: the oxic before maximum tillering stage, anoxic/suboxic stage before maximum tillering stage, and anoxic/suboxic stage in the panicle initiation stage and thereafter. Active members specific to the rhizosphere at either the oxic or anoxic/suboxic stage were found: Heterolobosea amoeba, ciliates, and Chytridiomycota fungi for the oxic stage and oomycetes, ciliates and Ascomycota fungi in the anoxic/suboxic stage. The present results demonstrate that a specific group of microeukaryotes inhabit the rice rhizosphere even under anoxic/suboxic conditions and play various ecological roles as plant parasites, microbial grazers and organic decomposers.
言語 en
内容記述タイプ Abstract
出版者
言語 en
出版者 Taylor & Francis
言語
言語 eng
資源タイプ
資源タイプresource http://purl.org/coar/resource_type/c_6501
タイプ journal article
出版タイプ
出版タイプ AM
出版タイプResource http://purl.org/coar/version/c_ab4af688f83e57aa
DOI
関連タイプ isVersionOf
識別子タイプ DOI
関連識別子 https://doi.org/10.1080/00380768.2016.1238281
ISSN
収録物識別子タイプ PISSN
収録物識別子 0038-0768
書誌情報 en : Soil Science and Plant Nutrition

巻 62, 号 5-6, p. 440-446, 発行日 2016-10-24
著者版フラグ
値 author
URI
識別子 http://doi.org/10.1080/00380768.2016.1238281
識別子タイプ DOI
URI
識別子 http://hdl.handle.net/2237/25724
識別子タイプ HDL
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