{"_buckets": {"deposit": "537061df-742b-4d0d-b502-d206192d6932"}, "_deposit": {"id": "29467", "owners": [], "pid": {"revision_id": 0, "type": "depid", "value": "29467"}, "status": "published"}, "_oai": {"id": "oai:nagoya.repo.nii.ac.jp:00029467"}, "item_10_biblio_info_6": {"attribute_name": "\u66f8\u8a8c\u60c5\u5831", "attribute_value_mlt": [{"bibliographicIssueDates": {"bibliographicIssueDate": "2020-02-06", "bibliographicIssueDateType": "Issued"}, "bibliographicIssueNumber": "1", "bibliographicPageEnd": "284", "bibliographicPageStart": "270", "bibliographicVolumeNumber": "113", "bibliographic_titles": [{"bibliographic_title": "Molecular Microbiology"}]}]}, "item_10_description_4": {"attribute_name": "\u6284\u9332", "attribute_value_mlt": [{"subitem_description": "The YggS/Ybl036c/PLPBP family includes conserved pyridoxal 5\u2032\u2010phosphate (PLP)\u2010binding proteins that play a critical role in the homeostasis of vitamin B6 and amino acids. Disruption of members of this family causes pleiotropic effects in many organisms by unknown mechanisms. In Escherichia coli, conditional lethality of the yggS and glyA (encoding serine hydroxymethyltransferase) has been described, but the mechanism of lethality was not determined. Strains lacking yggS and serA (3\u2010phosphoglycerate dehydrogenase) were conditionally lethality in the M9\u2010glucose medium supplemented with Gly. Analyses of vitamin B6 pools found the high\u2010levels of pyridoxine 5\u2032\u2010phosphate (PNP) in the two yggS mutants. Growth defects of the double mutants could be eliminated by overexpressing PNP/PMP oxidase (PdxH) to decrease the PNP levels. Further, a serA pdxH strain, which accumulates PNP in the presence of yggS, exhibited similar phenotype to serA yggS mutant. Together these data suggested the inhibition of the glycine cleavage (GCV) system caused the synthetic lethality. Biochemical assays confirmed that PNP disrupts the GCV system by competing with PLP in GcvP protein. Our data are consistent with a model in which PNP\u2010dependent inhibition of the GCV system causes the conditional lethality observed in the glyA yggS or serA yggS mutants.", "subitem_description_type": "Abstract"}]}, "item_10_description_5": {"attribute_name": "\u5185\u5bb9\u8a18\u8ff0", "attribute_value_mlt": [{"subitem_description": "\u30d5\u30a1\u30a4\u30eb\u516c\u958b\uff1a2021-02-06", "subitem_description_type": "Other"}]}, "item_10_publisher_32": {"attribute_name": "\u51fa\u7248\u8005", "attribute_value_mlt": [{"subitem_publisher": "Wiley"}]}, "item_10_relation_11": {"attribute_name": "DOI", "attribute_value_mlt": [{"subitem_relation_type_id": {"subitem_relation_type_id_text": "https://doi.org/10.1111/mmi.14415", "subitem_relation_type_select": "DOI"}}]}, "item_10_rights_12": {"attribute_name": "\u6a29\u5229", "attribute_value_mlt": [{"subitem_rights": "\"This is the peer reviewed version of the following article: [Ito, T., Hori, R., Hemmi, H., Downs, D.M. and Yoshimura, T. (2020), Inhibition of glycine cleavage system by pyridoxine 5\u2032\u2010phosphate causes synthetic lethality in glyA yggS and serA yggS in Escherichia coli. Mol Microbiol, 113: 270-284. doi:10.1111/mmi.14415], which has been published in final form at [https://doi.org/10.1111/mmi.14415]. This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for Use of Self-Archived Versions.\""}]}, "item_10_select_15": {"attribute_name": "\u8457\u8005\u7248\u30d5\u30e9\u30b0", "attribute_value_mlt": [{"subitem_select_item": "author"}]}, "item_10_source_id_61": {"attribute_name": "ISSN\uff08print\uff09", "attribute_value_mlt": [{"subitem_source_identifier": "0950-382X", "subitem_source_identifier_type": "ISSN"}]}, "item_creator": {"attribute_name": "\u8457\u8005", "attribute_type": "creator", "attribute_value_mlt": [{"creatorNames": [{"creatorName": "Ito, Tomokazu"}], "nameIdentifiers": [{"nameIdentifier": "96824", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Hori, Ran"}], "nameIdentifiers": [{"nameIdentifier": "96825", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Hemmi, Hisashi"}], "nameIdentifiers": [{"nameIdentifier": "96826", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Downs, Diana M."}], "nameIdentifiers": [{"nameIdentifier": "96827", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Yoshimura, Tohru"}], "nameIdentifiers": [{"nameIdentifier": "96828", "nameIdentifierScheme": "WEKO"}]}]}, "item_files": {"attribute_name": "\u30d5\u30a1\u30a4\u30eb\u60c5\u5831", "attribute_type": "file", "attribute_value_mlt": [{"accessrole": "open_date", "date": [{"dateType": "Available", "dateValue": "2021-02-06"}], "displaytype": "detail", "download_preview_message": "", "file_order": 0, "filename": "YggS-GCVfinal_version_1024.pdf", "filesize": [{"value": "563.3 kB"}], "format": "application/pdf", "future_date_message": "", "is_thumbnail": false, "licensetype": "license_free", "mimetype": "application/pdf", "size": 563300.0, "url": {"label": "YggS-GCVfinal_version_1024", "url": "https://nagoya.repo.nii.ac.jp/record/29467/files/YggS-GCVfinal_version_1024.pdf"}, "version_id": "176ae503-055c-4148-8c90-1cf17cc110a0"}, {"accessrole": "open_date", "date": [{"dateType": "Available", "dateValue": "2021-02-06"}], "displaytype": "detail", "download_preview_message": "", "file_order": 1, "filename": "GCV-yggS_for_revise2-final.pdf", "filesize": [{"value": "440.4 kB"}], "format": "application/pdf", "future_date_message": "", "is_thumbnail": false, "licensetype": "license_free", "mimetype": "application/pdf", "size": 440400.0, "url": {"label": "GCV-yggS_for_revise2-final", "url": "https://nagoya.repo.nii.ac.jp/record/29467/files/GCV-yggS_for_revise2-final.pdf"}, "version_id": "de30e0dd-2556-4a37-9614-631160944f1d"}]}, "item_language": {"attribute_name": "\u8a00\u8a9e", "attribute_value_mlt": [{"subitem_language": "eng"}]}, "item_resource_type": {"attribute_name": "\u8cc7\u6e90\u30bf\u30a4\u30d7", "attribute_value_mlt": [{"resourcetype": "journal article", "resourceuri": "http://purl.org/coar/resource_type/c_6501"}]}, "item_title": "Inhibition of glycine cleavage system by pyridoxine 5\u0027-phosphate causes synthetic lethality in glyA yggS and serA yggS in Escherichia coli", "item_titles": {"attribute_name": "\u30bf\u30a4\u30c8\u30eb", "attribute_value_mlt": [{"subitem_title": "Inhibition of glycine cleavage system by pyridoxine 5\u0027-phosphate causes synthetic lethality in glyA yggS and serA yggS in Escherichia coli"}]}, "item_type_id": "10", "owner": "1", "path": ["643/666/667"], "permalink_uri": "http://hdl.handle.net/2237/00031653", "pubdate": {"attribute_name": "\u516c\u958b\u65e5", "attribute_name_i18n": "\u516c\u958b\u65e5", "attribute_value": "2020-03-19"}, "publish_date": "2020-03-19", "publish_status": "0", "recid": "29467", "relation": {}, "relation_version_is_last": true, "title": ["Inhibition of glycine cleavage system by pyridoxine 5\u0027-phosphate causes synthetic lethality in glyA yggS and serA yggS in Escherichia coli"], "weko_shared_id": null}